Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903755.1_cds_XP_016453896.1_47973
CDS Infomation

[gene=LOC107778196] [db_xref=GeneID:107778196] [protein=probable polyamine oxidase 5] [protein_id=XP_016453896.1] [location=63084..64715] [gbkey=CDS]
Sequence

ATGGTGACACAAAAGCCAAAAATTGTGATAATTGGAGCTGGAATTTCTGGTCTCACAGCA
GCTAAAACACTCTACACAACACAAAACTCAAATGAACTATTTGAGCTTTGTGTTGTTGAA
GGTGGAAATAGAATTGGTGGAAGAATTTTTACTTCAGAATTTAATGGAGATCAAATTGAA
ATGGGAGCTACTTGGATACATGGAATTGAAGGTAATCCAATTTATAAAATTGCTCAAGAA
ATTAACTCATTGGAATCTGAAAAGCCTTGGGAATGTAAAGAAGGTAAATTAATGGATAAA
AAAGTGACAATAACAGAAGATGGCTATGAGGTAAATTCTTCCCTTGTTAAATCCATATCA
AATTTTTTCAACAAAATGTTAGCTTTTTCTTCAGGTGAAGGGAATTTTCAAGATGAGGTA
TGTAAAGAAATTGTTGAAAGTATAAATCTTGAAAATGGGAGTACAAAAAATCTAAGTACT
GGTTCTTTCCTTAGGAAAGGTCTTGAATTTTATTGGAATTTAAAGAAAGATCAAGAAAAT
GTTGAAGTGTTTGATAAATGGAGTAGAAAATCACTTGAAGAAGGTGTTTTTGCTATGTTT
GAGAATATACATAGGCATTATTCATCAGCTGGTGATTTGGGTACTTTAGATTTCAATGGA
GAAAGTCAGTATTGTAATTTTCCTGGAGATGAACTAACTATAGCCAAAGGGTACTCAACT
GTGGTTGAATCTTTGGCATCTGTTTTACCATCTGGTTTGATTCAATTAGGCCGAAAAGTC
ACAAAAATTGAATGGCAAAATGATGATTGTGACTTAAAATTTGAAAATGGTGATGGTACT
AAGCCAGTGAAGTTACATTTTAGTGATGGATCAGTAATGTATGCTGATCATGTCATTGTA
ACAGTCTCATTAGGGGTACTAAAACAAGGAATTCGCGACGACTTTGCTATGTTTAGTCCT
CAACTTCCTAGTTTCAAGACTCAAGCAATTTCAAGACTTGGTTTTGGTGTTGTTGACAAG
TTATTCTTGCAACTTAGTCCAAGTACTGAAGAATGTGGCTATGAGGGGATGAATTTTCCC
TACTTGCAAATGGTTTTTCATCAATCGGACGCGAAATTATTTCATTCAAAAATTCCCTTG
TGGATTAGGAGGACAGCTCTTATACATCCACTTTATCCAAAGTCAAGTACTTTAGTATCA
TGGTTTACAGGTAAAGAAGCTCTTGAGATGGAAACTCTAGATGACGAGGAGATCATAGAC
GGGGTTTCGACAACAATATCACAGTTTCTAGCAAACTCAAAGCATTTCAAGAACTCAGAT
TCTGCAGCAGCAGAAAGTTGTGTTAAGTTTTCAAAGGTTTTGAAGTGTAAATGGGGTACT
GATCCATTGTTTTTGGGATCATATACTCATATTGCAGTTGGATCAAGTGGAGATGATTTG
GATGTTTTAGCTGAGCCATTACCTAAAGTGGGAAATTATGGTAAAAATTCAAAGAATTGC
CCTCCACTTCAGATTTTATTTGCAGGGGAAGCAACACATAGATGCTACTATTCAACAACT
CATGGTGCTTATCTTACTGGAGTTAGAGAAGCCAATAGGCTACTTAAGCACTTTCAATGT
GTTGATATCTGA

Peptide Sequence

PEP ID

XP_016453896.1
PEP Infomation

PREDICTED: probable polyamine oxidase 5 [Nicotiana tabacum]
Sequence

MVTQKPKIVIIGAGISGLTAAKTLYTTQNSNELFELCVVEGGNRIGGRIFTSEFNGDQIE
MGATWIHGIEGNPIYKIAQEINSLESEKPWECKEGKLMDKKVTITEDGYEVNSSLVKSIS
NFFNKMLAFSSGEGNFQDEVCKEIVESINLENGSTKNLSTGSFLRKGLEFYWNLKKDQEN
VEVFDKWSRKSLEEGVFAMFENIHRHYSSAGDLGTLDFNGESQYCNFPGDELTIAKGYST
VVESLASVLPSGLIQLGRKVTKIEWQNDDCDLKFENGDGTKPVKLHFSDGSVMYADHVIV
TVSLGVLKQGIRDDFAMFSPQLPSFKTQAISRLGFGVVDKLFLQLSPSTEECGYEGMNFP
YLQMVFHQSDAKLFHSKIPLWIRRTALIHPLYPKSSTLVSWFTGKEALEMETLDDEEIID
GVSTTISQFLANSKHFKNSDSAAAESCVKFSKVLKCKWGTDPLFLGSYTHIAVGSSGDDL
DVLAEPLPKVGNYGKNSKNCPPLQILFAGEATHRCYYSTTHGAYLTGVREANRLLKHFQC
VDI

Transcript Sequence

Gene sequence data has not been registered.